paddlers/tools/geojson2mask.py

# Copyright (c) 2022 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#    http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import os
import os.path as osp
import shutil
import cv2
import numpy as np
import json
import argparse
import glob
from tqdm import tqdm
from PIL import Image
from collections import defaultdict


def _mkdir_p(path):
    if not osp.exists(path):
        os.makedirs(path)


def _save_palette(label, save_path):
    bin_colormap = np.ones((256, 3)) * 255
    bin_colormap[0, :] = [0, 0, 0]
    bin_colormap = bin_colormap.astype(np.uint8)
    visualimg  = Image.fromarray(label, "P")
    palette = bin_colormap
    visualimg.putpalette(palette) 
    visualimg.save(save_path, format='PNG')


def _save_mask(annotation, image_size, save_path):
    mask = np.zeros(image_size, dtype=np.int32)
    for contour_points in annotation:
        contour_points = np.array(contour_points).reshape((-1, 2))
        contour_points = np.round(contour_points).astype(np.int32)[np.newaxis, :]
        cv2.fillPoly(mask, contour_points, 1)
    _save_palette(mask.astype("uint8"), save_path)


def _read_geojson(json_path):
    with open(json_path, "r") as f:
        jsoner = json.load(f)
        imgs = jsoner["images"]
        images = defaultdict(list)
        sizes = defaultdict(list)
        for img in imgs:
            images[img["id"]] = img["file_name"]
            sizes[img["file_name"]] = (img["height"], img["width"])
        anns = jsoner["annotations"]
        annotations = defaultdict(list)
        for ann in anns:
            annotations[images[ann["image_id"]]].append(ann["segmentation"])
        return annotations, sizes


def convert_data(raw_folder, end_folder):
    print("-- Initializing --")
    img_folder = osp.join(raw_folder, "images")
    save_img_folder = osp.join(end_folder, "img")
    save_lab_folder = osp.join(end_folder, "gt")
    _mkdir_p(save_img_folder)
    _mkdir_p(save_lab_folder)
    names = os.listdir(img_folder)
    print("-- Loading annotations --")
    anns = {}
    sizes = {}
    jsons = glob.glob(osp.join(raw_folder, "*.json"))
    for json in jsons:
        j_ann, j_size = _read_geojson(json)
        anns.update(j_ann)
        sizes.update(j_size)
    print("-- Converting datas --")
    for k in tqdm(names):
    # for k in tqdm(anns.keys()):
        img_path = osp.join(img_folder, k)
        img_save_path = osp.join(save_img_folder, k)
        ext = "." + k.split(".")[-1]
        lab_save_path = osp.join(save_lab_folder, k.replace(ext, ".png"))
        shutil.copy(img_path, img_save_path)
        if k in anns.keys():
            _save_mask(anns[k], sizes[k], lab_save_path)
        else:  # have not anns
            _save_palette(np.zeros(sizes[k], dtype="uint8"), \
                          lab_save_path)


parser = argparse.ArgumentParser(description="input parameters")
parser.add_argument("--raw_folder", type=str, required=True, \
                    help="The folder path about original data, where `images` saves the original image, `annotation.json` saves the corresponding annotation information.")
parser.add_argument("--save_folder", type=str, required=True, \
                    help="The folder path to save the results, where `img` saves the image and `gt` saves the label.")


if __name__ == "__main__":
    args = parser.parse_args()
    convert_data(args.raw_folder, args.save_folder)